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Participants (in almost alphabetical order) & their talk titles
- Reininer Akkermans, Accelrys Inc., UK
Computational tools for modeling and simulation of nanoscale systems
- Tapio Ala-Nissila, Laboratory of Physics, Helsinki Univ. of Technology, Finland
Numerical Simulations of Polymer Translocation Through Nanopores
- Svetlana Baoukina,
Dept. of Biological Sciences, University of Calgary, Calgary (AB), Canada
Investigation of lipid monolayers with coarse-grained models
- Peter Bolhuis, University of Amsterdam, the Netherlands
Replication in micelle formation
- Thomas E. Cheatham, Dept of Med. Chem. & Pharmaceutics and Pharm. Chem., University of Utah, USA
Exploring nucleic acid structure at the atomic level: Can this be the
foundation for multiscale modeling of RNA?
- Colin Denniston, Department of Applied Mathematics, the University of Western Ontario, London (ON), Canada
Modelling nano-scale objects in a continuum description of a complex fluid
- Alex de Vries, Molecular Dynamics Group, University of Groningen, The Netherlands
Multiple scale modelling of lipid membranes: bridging atomistic models to macroscopic experiments
- Markus Deserno, Max Planck Inst. for Polymer Research, Mainz, Germany
Curvature-mediated interactions between membrane proteins
lead to aggregation and vesiculation
- Ralf Everaers, ENS Lyon, France
everaers at mpipks-dresden.mpg.de
www.mpipks-dresden.mpg.de/~everaers/
Organizer
- Ken Elder, Dept. of Physics, Oakland University, USA
Phase Field Crystal Modeling in Material Science
- Emma Falck, Beckman Institute for Advanced Science and Technology, Univ. of Illinois, Urbana-Champaign, USA
Multiscale Studies into Structure and Dynamics of Lipid Membranes
- Roland Faller, Dept. of Chemical Eng., Univ. of California, Davis, USA
Multiscale Modeling of structure and phase behavior in heterogeneous lipid
bilayers
- Mikko Haataja, Department of Mechanical and Aerospace Engineering, Princeton University, USA
Heterogeneous Lipid Bilayers: Evolving Microstructures in Biology
- Jesus Izaguerre, Notre Dame University, USA
Backward error analysis of multscale integrators
- Mikko Karttunen, Dept. of Applied Mathematics, the University of Western Ontario, London (ON), Canada
mkarttu at uwo.ca
www.softsimu.org
Organizer
- Kurt Kremer, Max Planck Institute for Polymer Research, Mainz, Germany
Adaptive Resolution Simulation Approach
- Alexander Lyubartsev, Physical Chemistry, Arrhenius Laboratory, Stockholm University, Sweden
Multiscale modelling based on effective potentials
- Filip Lankas, EPFL Lausanne, Switzerland
Towards consistent parametrization of coarse-grained models of DNA
- John Maddocks, EPFL Lausanne, Switzerland
Continuum mechanics models of DNA looping probabilities
- A.C. Maggs, ESPCI Paris, France
Multiscale Monte Carlo for simple fluids
- Bart Markvoort, TU Eindhoven, The Netherlands
Coarse-grained simulations of liposomes
- Siewert Jan Marrink, University of Groningen, the Netherlands
S.J.Marrink at rug.nl
www.rug.nl/gbb/
Organizer
- Teemu Murtola,
Laboratory of Physics, Helsinki University of Technology, Finland
- Marcus Müller, Institut für Theoretische Physik, Universität Göttingen, Germany
Assembly of Diblock Copolymers on Patterned Substrates:
A ``Single-Chain-in-Mean-Field-Simulation'' Study
- Martin Müser, Dept. of Applied Mathematics, the University of Western Ontario, London (ON), Canada
Two new (and unrelated) efforts to overcome length scales in MD
- Frank Peters, Dept. of Chemical Eng., Eindhoven Univ. of Technology, the Netherlands
Simulation of fluctuating hydrodynamics on a mesocopic scale
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Jelger Risselada, University of Groningen, the Netherlands
- Jörg Rottler, Department of Physics and Astronomy,
University of British Columbia, Vancouver (BC), Canada
Local algorithms for long ranged interactions
- Jay Schieber, Department of Chemical Engineering, Illinois Institute of Technology, USA
Modeling coarse-grained polymer with entanglements by
using stochastic slip-links
- Friederike Schmid, Universität Bielefeld, Germany
Spontaneous nanostructure formation in copolymer systems
- Julian Shillcock, Max Planck Inst. for Colloids
and Surfaces, Golm, Germany
Spanning length and time scales in simulations of membrane-associated processes
- Berend Smit
, Univ. of Amsterdam, the Netherlands / CECAM, Lyon, France
- Maria Sperotto, Technical University of Denmark, Lyngby, Denmark
A guided tour through the landscape of coarse-grain models for biomembranes
- Mounir Tarek, Equipe de dynamique des assemblages membranairesm Universite Henri-Poincare, Nancy, France
Interaction of cyclic peptide nanotubes with membranes
- Peter Tieleman,
Department of Biological Sciences, University of Calgary, Calgary (AB), Canada
Computer simulations of ABC transporters
- Ilpo Vattulainen, Institute of Physics, Tampere University of Technology, Finland
vattulai at csc.fi
http://www.tut.fi/index.cfm?MainSel=10775&Sel=13664&Show=17479&siteid=119
Organizer
- Maddalena Venturoli, CECAM, Lyon France
- Gregory Voth, Center for Biophysical Modeling and Simulation
and Department of Chemistry, University of Utah, USA
Systematic Multiscale Coarse-graining of Biomolecular and Soft Matter
Systems
- Julia Yeomans, University of Oxford
Low Reynolds Number Swimmers
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